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Compounds

COMPOUND NPA021727

STRUCTURE
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PROPERTIES
NPAID NPA021727
CLUSTER ID 6731
NODE ID 4664
NAME Agrocin 108
FORMULA C20H29N4O16P
MOLECULAR WEIGHT (Da) 612.4380
ACCURATE MASS (Da) 612.1316
ORIGIN ORGANISM TYPE Bacterium
ORIGIN GENUS Rhizobium
ORIGIN SPECIES rhizogenes strain K108
InChIKey YUMCOBIDABFYCR-HHLCLMOPSA-N
InChI InChI=1S/C20H29N4O16P/c21-8-1-2-24(19(33)23-8)17-12(30)13(39-18-10(28)9(27)6(26)3-36-18)7(38-17)4-37-41(34,35)40-14-11(29)15(31)20(22,5-25)16(14)32/h1-2,6-7,9-10,12-13,15,17-18,25-28,30-32H,3-5,22H2,(H,34,35)(H2,21,23,33)/t6-,7-,9?,10-,12-,13-,15+,17-,18?,20-/m1/s1
SMILES C1[C@H](C([C@H](C(O1)O[C@@H]2[C@H](O[C@H]([C@@H]2O)N3C=CC(=NC3=O)N)COP(=O)(O)OC4=C([C@]([C@H](C4=O)O)(CO)N)O)O)O)O
ORIGINAL ISOLATION REFERENCE
CITATION Elvin, Christopher M.; Asenstorfer, Robert E.; Ryder, Maarten H.; Donner, Scott C.; Jones, Graham P.; Tate, Max E. Agrocin 108 is a 5'-cytidine nucleotide bacteriocin containing a carbocyclic phosphoryl-ascorbate group Journal of Antibiotics 2018 71 (4) 438-446.
DOI 10.1038/s41429-017-0014-y PMID 29348528
ORIGINAL ISOLATION TAXONOMY
RANK NAME DB LINK NCBI
Domain Bacteria LPSN 2
Phylum Proteobacteria LPSN 1224
Class Alphaproteobacteria LPSN 28211
Order Rhizobiales LPSN -
Family Rhizobiaceae LPSN 82115
Genus Rhizobium LPSN 379
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