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Antonovsky, Niv; Zhang, Mengyin; Shang, Zhuo; Montiel, Daniel; Maniko, Jeffrey; Ternei, Melinda A.; Calle, Paula Y.; Lemetre, Christophe; Owen, Jeremy G.; Brady, Sean F.","title":"Uncovering the biosynthetic potential of rare metagenomic DNA using co-occurrence network analysis of targeted sequences","journal":"Nature Communications","year":2019,"volume":"10","issue":"1","pages":null},"origin_organism":{"id":186,"type":"Bacterium","genus":"Streptomyces","species":"albus","taxon":{"id":283,"name":"Streptomyces","rank":"genus","taxon_db":"lpsn","external_id":"517119","ncbi_id":1883,"ancestors":[{"id":1,"name":"Bacteria","rank":"domain","taxon_db":"lpsn","external_id":"0","ncbi_id":2},{"id":203,"name":"Actinobacteria","rank":"phylum","taxon_db":"lpsn","external_id":"0","ncbi_id":201174},{"id":204,"name":"Actinobacteria","rank":"class","taxon_db":"lpsn","external_id":"0","ncbi_id":null},{"id":275,"name":"Streptomycetales","rank":"order","taxon_db":"lpsn","external_id":"0","ncbi_id":85011},{"id":276,"name":"Streptomycetaceae","rank":"family","taxon_db":"lpsn","external_id":"0","ncbi_id":2062}]}},"syntheses":[],"reassignments":[],"mol_structures":[{"current_structure":true,"reference_doi":"10.1038/s41467-019-11658-z","structure_smiles":"CC1CN2C(=O)[C@H](CC3=CC=CC=C3)NC(=O)[C@@H](C(C)C)NC(=O)[C@H](CC3=C[NH]C4=C3C=CC(Cl)=C4)NC(=O)[C@H](C(C)C(N)=O)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](CCC(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)C[C@H](N)C(=O)O)C(O)C3=CC=C(O)C=C3)C(C)O)COC(=O)[C@@H]2C1O","is_reassignment":false,"version":1}],"exclusions":[],"external_ids":[{"external_db_name":"mibig","external_db_code":"BGC0002078"},{"external_db_name":"mibig","external_db_code":"BGC0002079"},{"external_db_name":"npmrd","external_db_code":"NP0020456"}],"classyfire":{"class":{"url":"http://classyfire.wishartlab.com/tax_nodes/C0001813","name":"Peptidomimetics","chemont_id":"CHEMONTID:0001813","description":"Compounds containing non-peptidic structural elements that is capable of mimicking or antagonizing the biological action(s) of a natural parent peptide."},"smiles":"CC(C)[C@H]1N=C(O)[C@H](Cc2c[nH]c3cc(Cl)ccc23)N=C(O)[C@@H](N=C(O)[C@H](COC(=O)[C@@H]2C(O)C(C)CN2C(=O)[C@H](Cc2ccccc2)N=C1O)N=C(O)[C@@H](N=C(O)[C@@H](CCC(O)=O)N=C(O)[C@H](CO)N=C(O)[C@@H](N=C(O)C[C@H](N)C(O)=O)C(O)c1ccc(O)cc1)C(C)O)C(C)C(O)=N","kingdom":{"url":"http://classyfire.wishartlab.com/tax_nodes/C0000000","name":"Organic compounds","chemont_id":"CHEMONTID:0000000","description":"Compounds that contain at least one carbon atom, excluding isocyanide/cyanide and their non-hydrocarbyl derivatives, thiophosgene, carbon diselenide, carbon monosulfide, carbon disulfide, carbon subsulfide, carbon monoxide, carbon dioxide, Carbon suboxide, and dicarbon monoxide."},"inchikey":"InChIKey=TVZYKKNRWFVGID-XMQDSMCMSA-N","subclass":{"url":"http://classyfire.wishartlab.com/tax_nodes/C0001961","name":"Depsipeptides","chemont_id":"CHEMONTID:0001961","description":"Natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids), commonly but not necessarily regularly alternating."},"ancestors":["1-hydroxy-2-unsubstituted benzenoids","3-alkylindoles","Alcohols and polyols","Alpha amino acid esters","Alpha amino acids","Alpha amino acids and derivatives","Amines","Amino acids","Amino acids and derivatives","Amino acids, peptides, and analogues","Aromatic alcohols","Aryl chlorides","Aryl halides","Azacyclic compounds","Benzene and substituted derivatives","Benzenoids","Carbonyl compounds","Carboximidic acids","Carboximidic acids and derivatives","Carboxylic acid amides","Carboxylic acid derivatives","Carboxylic acid esters","Carboxylic acids","Carboxylic acids and derivatives","Chemical entities","Cyclic carboximidic acids","Cyclic depsipeptides","Depsipeptides","Heteroaromatic compounds","Hydrocarbon derivatives","Indoles","Indoles and derivatives","L-alpha-amino acids","Lactams","Lactones","Macrolactams","Macrolide lactams","Monoalkylamines","Organic 1,3-dipolar compounds","Organic acids and derivatives","Organic compounds","Organic nitrogen compounds","Organic oxides","Organic oxygen compounds","Organochlorides","Organohalogen compounds","Organoheterocyclic compounds","Organonitrogen compounds","Organooxygen compounds","Organopnictogen compounds","Oxacyclic compounds","Peptidomimetics","Phenols","Phenylpropanoids and polyketides","Polyols","Primary alcohols","Primary amines","Propargyl-type 1,3-dipolar organic compounds","Pyrroles","Pyrrolidines","Secondary alcohols","Substituted pyrroles","Tertiary carboxylic acid amides","Tricarboxylic acids and derivatives"],"superclass":{"url":"http://classyfire.wishartlab.com/tax_nodes/C0000264","name":"Organic acids and derivatives","chemont_id":"CHEMONTID:0000264","description":"Compounds an organic acid or a derivative thereof."},"description":"This compound belongs to the class of organic compounds known as cyclic depsipeptides. 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